rs220290747 SNP Detail

Summary

• ID
  rs220290747
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61901318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGAAGTTG CTCCCCACAA
  CCCCAGAACC TTAGAACCAG GTGGTAAAGT GCGGCCTCGG GTGTGGCTCT CACGTTGATT
  ACACTTGACG TTAGATTTCC TATGATTCCC ACATTTCCAG CTGCTCTGGA AGATCAAAAG
  ATGAAAATGG GGTGGGGCTC ACGTTCCTCC AAGGCCCAAG CTGGCCTGCT ACCCTGTTCT
  R
  TGCACTCCAG TTTGCTCCAG CTAGTCACTT GGTCTCAGCT TGGATTCCTC CAGGGACAGG
  AGGCTCTCTG GTCCCAGGGA CAGCTGATTC ATTCTGGCAA ATTCTGGTAG AAAAGACTTC
  CCCATGTGAA GTAACAACCT GGTACCCTGG AGGTTCACCA CAGTCCACAC ATCACTGAGC
  ATCTGGGATA CCTGCTATGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330702	CHEV_10_61528287	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220290747					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61901318 () rs orientation: forward

Symbol	Name	Function Class
D10Mit149	DNA segment, Chr 10, Massachusetts Institute of Technology 149	1589 bp proximal
Tssr93687	transcription start site region 93687	1076 bp upstream