rs220316077 SNP Detail

Summary

• ID
  rs220316077
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7777952 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCAGTTTA CTCCTTCCGG
  AAGCTTCCAT GGCTTTCCTT CCTTAACCTC TGGTCTCGGT TCCGTCCCTC GCGTCCCATT
  TGTTCTCCCT GGCTCTCTGC GTGGCCTAGA TCTGCTATCT TACAAGAAGG CCTGTAAAGG
  GGCTGGCCAG ATGGAGCAGC AAGTAATGGG ACTTGCTACC AAGTCTGAAG ACTTAAGTTC
  R
  AGGCCTCAGA ACCCATGTAG TGAAAAACAG AACCAGCTCC CACAAGCTGT CTTCTAATGT
  CTACATGTGT GTTGTGTATG CACTAATATT TAGAAAAAGT TTGTTTCCAG ACAGGGTTTT
  TCTCTGTGTA GCCCTGGCTG TCCTGGAACT CACTCTGTAG ACCAGGCTGG CCTCGAACTC
  AGAAATCCAC CTGCCTCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325888369	CHEV_X_7488839	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220316077					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7777952 () rs orientation: forward

Symbol	Name	Function Class
Gm10490	predicted gene 10490	1785 bp downstream
Rr689690	regulatory region 689690	1029 bp distal