rs220329374 SNP Detail

Summary

• ID
  rs220329374
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:79211510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCTTCTAA GCCTTCCTTT
  CACCTTTTTC CTTCCAGAAG GAAACTGGGG AACTGGATAA AGAGAGAACT GGACAGGCAG
  AACCTTATCA CAGCAACTAG TTCTGTTGTC TCTCTTCCCT GCCCCAATTG TGCTGCCCTT
  GAGTAAGTAT TTCCCCCTGG ACAGACAACC ATCCTCCAAC CCTGTGGGAA CGCCTCACCC
  M
  TCACAGGCCA CCTAGCAGCG CATTCTGCAG CCCAGCATGA ATCCTGGTCT GGTCATCAAG
  AAAATATCTG TGTTGGGCCT TTGTGCACTT TTCTTTCAAT ATGGGATATG CTGGTGGTAA
  AGGAGAGCGC CGTGGACAAC TCTCTCTTCC AGAGGTGTTA TAAGGATAAA TGAAATGATC
  TTCATATAGC ACTTTAGGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322720224	CHEV_8_81008780	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220329374					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:79211510 () rs orientation: forward

Symbol	Name	Function Class
Gm2225	predicted gene 2225	1153 bp downstream
Rr186904	regulatory region 186904	1091 bp proximal