rs220330134 SNP Detail

Summary

• ID
  rs220330134
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8414194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTCTCAGTT TTCAGACTCA ACCGCTGCTA
  GCAAATTTGA AGCGTTTTTA GAAATATCAT CACATGGTAC ACAGACTTGA TTCCCTGCAT
  CATGAAGAGT TTAATGAAAA CAACGGGCAC TGTCATTTGA AGCCTGCGCG TTGAGGGCTG
  Y
  GCCAGGCCTG AGAAGATGGC CACTCATTTG GTATTTGGGT TATTTCTATT TGTTTTTGTC
  CCTCTGTGAT TCTAGGTACC ATGGTGACTT TGGGGACCAT TCTGGGAACG TTCTCTTTAG
  TTTGCCAGGT TCTCTGTTAC TTGAAAGCAC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323885760	CHEV_12_8371000	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220330134					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8414194 () rs orientation: forward

Symbol	Name	Function Class
Gm33134	predicted gene, 33134	within coordinates
Rr462572	regulatory region 462572	within coordinates
Rr462573	regulatory region 462573	1082 bp proximal
Rr462574	regulatory region 462574	1809 bp proximal