rs220367665 SNP Detail

Summary

• ID
  rs220367665
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119006362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTACAGGTT GTACGTGTGT
  CTGTGTGTGT GTGTGTGTTT GTGTGTGTGT GTGTGTGTGT GTGTGTAAGC ATATAGAAGT
  GAGAGGCCAA CCTTAGGGAT CCTTCCTCAG GAACCAGCCA GCTTATTTTT TGAAATAGCT
  TCTCTCAATA GGACCCAGGA CTAACCAATG ATGCTAGACC GGCTGATCAG CGAGCCCAAG
  R
  ATCTTCCTGG CTCTGTCTCC CCATTGCTGG GATTAAAAGT GTGTAGTCCC ACATTTGGCT
  TCTACATGGA TACTAGGCGC CAAAATTAGG TTCTCACATC TGCATGGCGG CAATTCACCT
  ACTGGATCTA TCTGCCCAGC CCTATGTTAA TAACATTTTT AAAAATTCCT TAAAGTCAAG
  TTGTCTTAGA TACATGACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323217930	CHEV_9_119086414	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220367665					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119006362 () rs orientation: forward

Symbol	Name	Function Class
Rr193313	regulatory region 193313	1039 bp proximal
Rr211575	regulatory region 211575	1949 bp proximal
Slc22a14	solute carrier family 22 (organic cation transporter), member 14	within coordinates