rs220371881 SNP Detail

Summary

• ID
  rs220371881
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52845830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTACTTTT AGAAAGGCTT CTTGTATCTG
  TCATTGCTCT ATTTCAGGTG TGAGCTATCT TCCCCCACTG AGAAAGGAGC TGCAGGAGAT
  GTAAAGTCAG GACAGTGGTC CTATGATCCC AGACAATGAC TGTTCAGTGC TGAATTGGAA
  T
  TGTCTACCTT CATTTTACTT TACGGCTTCT GTCAGCACCG TCCTGTTTGT TGTTTCATCA
  AGTTACTTAG CTAAATTCTC TGTGATGTTC TCAAATGTGT GTAACAATGG AGCCCTTCTC
  TACTGAGCCC AAAGTCAGCA AACTCCAGTG                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324040928	CHEV_12_53900034	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220371881					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52845830 () rs orientation: forward

Symbol	Name	Function Class
Akap6	A kinase anchor protein 6	within coordinates
Gm51971	predicted gene, 51971	within coordinates
Gm59837	predicted gene, 59837	443 bp downstream
Rr466054	regulatory region 466054	677 bp proximal