rs220386147 SNP Detail

Summary

• ID
  rs220386147
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:88874519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGGAGATA TTACAAAACA AGAAAAAAAA
  GAAAAAAAAT TCCTGGTAGT CATGCTGGTA CATGTCTGTA ATCTCCAGGA TGCAGGAACA
  CTGCCAGTTT GAGCCTGTGA CACGTGTGAG ACCTTGCCTC AAAAAGTCAG AGAATGgccg
  R
  gtgtggtggc gcacaccttt aatcccagca ctggggaggc agaggcaggc ggatttctga
  gttcgaggcc agcctggtct acaaagtgag ttccaggaca gccagagcta taccgagaaa
  ccctgtctcg aaaaaccaaa aaaaaaaaaa                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321602385	CHEV_5_89155685	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220386147					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:88874519 () rs orientation: forward

Symbol	Name	Function Class
Mob1b	MOB kinase activator 1B	Intron
Rr614172	regulatory region 614172	1662 bp distal
Rr614174	regulatory region 614174	685 bp distal