rs220399237 SNP Detail

Summary

• ID
  rs220399237
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102984951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctgctcacc aacccaccca cacctgcttc
  ctggccctgg cattccccta cactggggca ttgagccttc acaggaccaa gggcctctcc
  tcccattgat gtcttactag gccatcctct gctacatgtg cagctggagc catgagtccc
  R
  ccatgtgtac cctttggttg gtggtttagt cccagggagc tctaagggta ctggttagtt
  catattgttg ttcctcctat ggagctgcaa accctgtcag cttcttaggt cctttctcta
  gctccttcat tggggaccct gtgctcggtc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323160329	CHEV_9_103010082	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220399237					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102984951 () rs orientation: forward

Symbol	Name	Function Class
Gm46128	predicted gene, 46128	within coordinates
Rr401633	regulatory region 401633	790 bp upstream
Rr685855	regulatory region 685855	400 bp proximal