rs220462412 SNP Detail

Summary

• ID
  rs220462412
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:137179484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tggtaagaa cgagaggtta gggaggatga
  gtgaattgtg taggacaggc atgaactcat agactcaagg gagctgtggt tgcccacaca
  agatctgtgc aagctcaagc cagtcaatat tctactgtgg gataaagtcc cacgcctagc
  W
  aagagctatt ggtagcagct ggcgtctagg tgagggacag tgagtgtttt aaaggatata
  tcctctgtta ggtggatcac attcctgtgg atggccttat acccaggagt atatgggcag
  cacaaattag acttggtaga ttattttaaa                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319998175	CHEV_1_139148323	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220462412					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:137179484 () rs orientation: forward

Symbol	Name	Function Class
Gm19215	predicted gene, 19215	678 bp upstream
Gm37057	predicted gene, 37057	396 bp upstream