rs220571926 SNP Detail

Summary

• ID
  rs220571926
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61844949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAAGATCA GAACACTTTT
  TAGACAAGAG AACTCCTAAA ATTGCAGTTT GTCCTAGTTT CCTGTCAAGG ACAGCTAGTA
  ACTCCAAAAT AGACACGGCT CGTTTCTCAT TGTTTCCATC TGTCAACCTT GTAGTAATGA
  GGGCAGGAGG GGGCAAACGC CAACTGTGGA ATTTCACTGC TTATTAAATT TACAATATTC
  R
  CCTAGTGGAG GAGTAAAATA ATGCCTTGCC AAGAGAATCT TCTGACTTCA GAAGGTGCTG
  GGAACAAACC CTGGTTCTCT GGGAGAGCAG CCAGAGCGTT CTTCACCAGA GTCATGTCCC
  AGCCCCCAGG AAGCAGTACT TTTAAAGTGT ACCCACATGG TGGTTTACAA CCCTCTCTAA
  CTCCTATTCC AGGGGATCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325645178	CHEV_18_61871532	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220571926					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61844949 () rs orientation: forward

Symbol	Name	Function Class
Gm17883	predicted gene, 17883	1817 bp upstream
Grpel2	GrpE-like 2, mitochondrial	546 bp downstream