rs220603721 SNP Detail

Summary

• ID
  rs220603721
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:111256886 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttgtgcca accctgataa acccgataaa
  ggattagaga ctccatggag cagagacaag cctgccagac agaaccctcc tggaccagac
  agcacctagc cactctatcc agcaagagca ctgagggagc ccacctgagc ctatgttaac
  Y
  acaTCATGAA GGCTAAATAA GGGGCTGTGA TTTTGTGACG TTGGGTTTTG GAGTTAGTGT
  CTTGTGGGTG CTGTGTTATT ATGGtgtatg tgtgttatgt atgcacgtat gtatgtacgt
  gtgcctgtgt gtGAGCATAT Gtgtgcatga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323196665	CHEV_9_111330322	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220603721					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:111256886 () rs orientation: forward

Symbol	Name	Function Class
Rr192826	regulatory region 192826	315 bp proximal
Rr198795	regulatory region 198795	715 bp proximal
Rr202628	regulatory region 202628	129 bp proximal
Rr202629	regulatory region 202629	479 bp proximal