rs220673786 SNP Detail

Summary

• ID
  rs220673786
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:16424982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTCCTGAGT GTCAGGTAAC ACACCATTCA
  CGGTTAGCAA GATGAGTGGC AGGCAAGGCA CCATTCACAA ACAGTGAAAC AGAGTCTGAA
  TGGCTCAAAC Cttttctcca gacctccata ttaaaatttg attgtcactg ggatagtttc
  K
  ggaaatggag cctttaaaag gtatttgggc catgaggttt cccctaataa atATATTAAC
  GTTGTAACCA CAGGAGTGAA TTCATTCCTT TCATGCTAAA TTGCTTGCTT TTTCCTACTT
  TGGccctctt ttcacccctc tccctctctc                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323915879	CHEV_12_16381787	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220673786					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:16424982 () rs orientation: forward

Symbol	Name	Function Class
Gm36372	predicted gene, 36372	within coordinates
Rr269311	regulatory region 269311	within coordinates
Rr386910	regulatory region 386910	within coordinates