rs220690683 SNP Detail

Summary

• ID
  rs220690683
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:91858597 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATT CAGGATACAC CCCAGGCTGG
  Y
  CTCAAACTCC CAATCTTCCT GCCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322789564	CHEV_8_93655868	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220690683					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91858597 () rs orientation: forward

Symbol	Name	Function Class
Aktip	AKT interacting protein	within coordinates
Cpgi20808	CpG island 20808	1449 bp proximal
Rr667489	regulatory region 667489	1122 bp proximal
Tssr82405	transcription start site region 82405	1980 bp downstream