rs220695061 SNP Detail

Summary

• ID
  rs220695061
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:61929041 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCACAGAA CAAGCCAGGA
  TATCTATACA AAGCACAGAG GAACGGGGGC ACCTGCTAGA ACATCTGCAT GTCTCCATGG
  CTATTACAAC CCCTGCCTAC CTGGCTACCT CTAATTCACT TTGTTCCTTA CCGGTTCCAC
  TCCATCCCCA CTTCCAGGTC CTCAGTAAGA CGAGCTCTTA TCCACCCCAT GCCTCTGCAC
  M
  TGCTGTTTCC CTGGGCCTAG ATTGCTCCTC CTTCTGCCCT CTGGCTGGTC ATTTTCCTCT
  CTCGCTGGGT ATTCACGGGG AGTTCCTTTC CCGTAGCATC CCGTTTTCTG TCTCCGTAGG
  AGCTGTCTCC ATGTGCTCTC TCTGTTTACT TACTTAGAAC ATGTTTCTTC TCTAGACCTG
  CACATGGGAG GCGCATCTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325645799	CHEV_18_61955624	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220695061					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:61929041 () rs orientation: forward

Symbol	Name	Function Class
Gm35919	predicted gene, 35919	within coordinates
Rr346545	regulatory region 346545	1641 bp distal
Rr356351	regulatory region 356351	1833 bp distal