rs220753824 SNP Detail

Summary

• ID
  rs220753824
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20988553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAGTCCCCA CTGTCTTAGt tttggttttg
  agacaggatc tcactgaagt gcacagactg ccctcgagac gacacgagtg tagccagctt
  tgagcttctg ctccttctgc ctctggctcc taagtagctg ggaatgtaag cctgcaccag
  S
  aaacctggtG ATGGATTTCA GTCTAGACTT CAAGTCTGTA AGTAAGAAGT TAGCCATGCT
  AATAACAAAA GTAGGTATGC CAGACATTTG TTTGTGGTGC TGTCGAGGAC AGATAGGCAG
  ATAAAGGGAA GTCATGGTTA AAAAGCTAGG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319654652	CHEV_1_20908410	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220753824					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20988553 () rs orientation: forward

Symbol	Name	Function Class
Paqr8	progestin and adipoQ receptor family member VIII	within coordinates
Rr407023	regulatory region 407023	1629 bp proximal
Tssr6058	transcription start site region 6058	475 bp downstream
Tssr6059	transcription start site region 6059	470 bp downstream