rs220765235 SNP Detail

Summary

• ID
  rs220765235
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106528840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGCCTGGGA TGGAGAGAGA TTAGCACTTG
  GCTGCACCAG CATAAAGAGA CAGCAGGAGT CATCTGGGAT ACTCAAAGAT GCCAAtctct
  ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct ctctctctct
  S
  Agtgtgtgtg tgtgtgtgtg tgtTTAGTAC AGGCAGTCCT TCTTTAGTGA CAATTTTCAT
  GGGAAGTTGG ACAAAAGTCA CCCCAGGAAG AAAGGCTTAG ATCCAAGGGT CACAGAGCCT
  TGGAAGCCCA AGTTGGTCTC CATTGGATGC                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323186549	CHEV_9_106553972	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220765235					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106528840 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22272	CpG island 22272	453 bp distal
Grm2	glutamate receptor, metabotropic 2	within coordinates
Rr686377	regulatory region 686377	1263 bp proximal