rs220789762 SNP Detail

Summary

• ID
  rs220789762
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82931010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCGG CTTCTGGTTT CTTTTTTTTA
  R
  TTCCTCTTTT TTTAAAAAAA TTGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321843724	CHEV_6_82904023	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220789762					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82931010 () rs orientation: forward

Symbol	Name	Function Class
Gm19287	predicted gene, 19287	893 bp downstream
M1ap	meiosis 1 associated protein	within coordinates
Rr379683	regulatory region 379683	1906 bp upstream
Tssr57262	transcription start site region 57262	1286 bp downstream