rs220797386 SNP Detail

Summary

• ID
  rs220797386
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:110563301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAAATGTG ACTTGGGAAG
  GAAGAGATTA CTTTAGTTCA GTGCAGTCTA TAATGGCAGA GAAAGCAAAG TTTCAGGAGG
  CTAATAGAAC GGTCACATTG ACTGTCCTGT GAGTGAACAG AGAGCCAGTA ATGTTTATTC
  TCAGTTCTCA GGTGATTCTT CTTTTTATTC AATCCCTGAC CCCTGCCCAT GGAATGATCA
  S
  TATCAACATT TAGAGCATGC CTCCTCATCT CTATTATCTA TTTATCTAAA ATAAAAAAAA
  ATCCTTCATT GTCATATGCA ATCATTTGAC TTTAAGGAGA ACCTAGAATG TCTCAGGAAT
  TGTGAGGCAT CACACCTGGA GCAAAACAAA AGTAAAGTTC TGGGTTTCAC CAAGTTCAGA
  AGACTCCAAG ATGTATAAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320873324	CHEV_3_110458903	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220797386					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:110563301 () rs orientation: forward

Symbol	Name	Function Class
Rr583481	regulatory region 583481	1518 bp proximal