rs220800663 SNP Detail

Summary

• ID
  rs220800663
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:8252651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtttatcag tgttctcctg tgtttcttta
  agtgagttat taaagtcctt cttgatgtct tctaccatca tcatgagata tgcttttaaa
  tccgggtcta gtttttcggg tgtgttgggg tgcccaggaa tgggtggggt gggagtgctg
  Y
  attctgatga tggtgggtgg tcttggttta tgttagtaag attcttacgt ttgcctttcg
  ccatctggta atctatggag ttagttgttg tagttgtctc tggtttgatc ctgttcctca
  ggtgtttatg ttagcctcta tcagcagacc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321460785	CHEV_5_8202651	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220800663					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:8252651 () rs orientation: forward

Symbol	Name	Function Class
Adam22	a disintegrin and metallopeptidase domain 22	within coordinates
Gm55253	predicted gene, 55253	1215 bp downstream