rs220814361 SNP Detail

Summary

• ID
  rs220814361
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:5679653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAAGGAA TTCCTGAAAA
  GTTTTAAGTG AGTAGGGAAG GCCAAACTTA AGTATGAGTA ACATCATCCC AAGGACGGGA
  ATACTAGACT ACTGAATAGA AAAAGATGGA AAGAAAGATG GGCACCAGGA TCTCTCCCTC
  TCCCTGCTCC ATCTCATCTT TGTCTCTCTC CCTCCACTAC TTGAATCTCC CTGTCTATCT
  R
  TCTTCTTCCT CTCTCCCTCC TTCCCTCCCT CTGCTCTCTC TGTCTCTTTC AAGCTGTCTC
  TCTCCCCCTC TGTGTGTCTC TGTCTTTTTC TCTGTGTCTC TCACTCACTC CTTCCTCTCC
  CCACTCCCCA CTTCTTGACT GAGAATGAAA TGTGAGCAAT TACCCCATAG TTTCTCCACC
  ATGCTTTTCC TGCTATGGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324222379	CHEV_13_5628900	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220814361					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:5679653 () rs orientation: forward

Symbol	Name	Function Class
Rr279792	regulatory region 279792	1603 bp proximal
Rr284365	regulatory region 284365	1253 bp distal