rs220829635 SNP Detail

Summary

• ID
  rs220829635
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:115537467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTCGGGCTG TAAACGAGGC AGTCCTAACC
  AGAACTCCTG CTCATACGTG AGGAGGACTG AGTGCATCCC TCACAGGCTG GCTGCACAGG
  GACTCAACCA CCTGAGTGCC AACTGCAGAG CCTCACTGCC ATGAGGTCGG CCTGAGCACA
  Y
  AGGAAGTCGC TGTGGTGTCA CGCCTGGGCC TTCACACTTG CTGGAAGTGA GTAAAGCTCT
  TTGCTTACCT GTGGCATCTG TTCTATGTCC CGTAAGAATA TCTGCTGGTT CCTGGACACG
  GATGTTGATC TGTGGTAATC TACCAGCTCA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323863496	CHEV_11_115507955	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220829635					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:115537467 () rs orientation: forward

Symbol	Name	Function Class
Grb2	growth factor receptor bound protein 2	within coordinates
Rr459980	regulatory region 459980	294 bp distal
Rr459981	regulatory region 459981	845 bp proximal
Rr459982	regulatory region 459982	993 bp proximal
Tssr111788	transcription start site region 111788	1576 bp upstream
Tssr111789	transcription start site region 111789	1402 bp upstream