rs220918694 SNP Detail

Summary

• ID
  rs220918694
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:51728662 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATACCCCC ATTCCGGCCC CGTTTCTCAG
  CACTCAGGTC TCTCGTCGGA AAACAGGGAA GGCTGCGGTG TCTTTCGAGC AAAAGTGAAG
  ATGAAGGAGA AGGGCGCCGA GGGGAGAGCG CGGTCAGCCC GCGCCTGGGG AAGGCGGCAG
  R
  AAGCGCGCCC GGCAGGGATC AGCCTCACAC GTGGGCCTGT GGCCGCAACC CGCACTCACC
  AGGCCGTCGA TCTGCACCTG CTTCACGGCC GAATCTCCGG AGCCGCCTTT GCCTTTGCCC
  TTCCCCACCG CGCCGCCAGC AGAACCGGAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324965543	CHEV_15_51696812	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220918694					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:51728662 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7083	CpG island 7083	within coordinates
Eif3h	eukaryotic translation initiation factor 3, subunit H	within coordinates
Rr404375	regulatory region 404375	179 bp upstream
Tssr134286	transcription start site region 134286	182 bp downstream
Tssr134287	transcription start site region 134287	232 bp downstream