rs220940547 SNP Detail

Summary

• ID
  rs220940547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36070593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCCCAGTCA GGATGTGATA CAGGAAAAGA AAGCCCTTGC
  TTCTCCCTGC CCACCATGCC ACGCAGTTCT GCTAATACCC TGCAGGGGGC GCATGCTACA
  R
  TCCAGCTTGA CTTCAGCACA CCTCCAGGTG TGCTCTCTTT TGCCAGCTTC TTCTCCTCTA
  TCAGTCGATG GAACAGGGTC AAGAATAAAC CCAAGCCTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324315045	CHEV_13_35978479	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220940547					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36070593 () rs orientation: forward

Symbol	Name	Function Class
Rr271494	regulatory region 271494	1393 bp distal
Rr271495	regulatory region 271495	within coordinates
Rr283230	regulatory region 283230	1031 bp distal