rs220970954 SNP Detail

Summary

• ID
  rs220970954
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:128617549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTGGCTCG GCCAGGCCCG TCCCCACACC
  AGCAAGCCAT CATCCCTGCC ATACCCGGTG GCTTGCCTGG ACCCAAGAGT CCCAACATCC
  AGCAGTGCCC AGCTCACGGT ATGGAGTGTT GGGGAAGGGA GGAAGTTGGC TTTGCCTGCC
  R
  CTTCCTGGCA TCTTTTTCTC GGTGTCCAGG AGGGGAGGTA AACTGCCTTA AACCTAACGA
  AGCAACATGG CAGCTGCGTA GTTGGAAACA GAGAGGGGAA GTGAGGGCAC GGGCCAGGGA
  CAGAGGTGGC CCGGGACCTG GAAAAGCAGG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321306934	CHEV_4_128401000	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220970954					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:128617549 () rs orientation: forward

Symbol	Name	Function Class
Gm33712	predicted gene, 33712	within coordinates
Phc2	polyhomeotic 2	within coordinates
Rr600014	regulatory region 600014	371 bp proximal
Tssr39071	transcription start site region 39071	1565 bp downstream