rs220987289 SNP Detail

Summary

• ID
  rs220987289
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99141974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACACCATAA ATAGTCTGTC
  TTACTGCTCT GGCTTGCTCT CCTGCACCCT GAGTATTAAC AACCTCCCCC ACTTCTCTCC
  ACAGGAGGAT TTGAAATACT ATGGTTGATA CTCATAGGAT CTTCTTGTGT GGGAAACTTT
  ACCTGGGGTA GGGCCTGAGT TGCTGGGTTC TCTGATCCTT CCTTCTTTAC CCCGTTCTCA
  Y
  TGTTGGGGTA ATTGCACGGA GAACCCCTGT GAGGTGGATA TATATCATCA TGTATAATTG
  GACTTCCTGT CTTGAACTGG AACTCCACAG GGCCTGTAAC ATTTGCTTCT TCCCCACCCT
  TTTTTTAACA AACTTTTTTT TATCAAACTT GAGTCTCTAC TTCCAAAAGG TTCTTCTTGG
  GCTTTTTCTT TATGTCAATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135185	CHEV_9_99160340	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220987289					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99141974 () rs orientation: forward

Symbol	Name	Function Class
Cep70	centrosomal protein 70	within coordinates
Gm18914	predicted gene, 18914	1024 bp downstream
Gm47199	predicted gene, 47199	within coordinates