rs221005162 SNP Detail

Summary

• ID
  rs221005162
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70847429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTCTCATC CTTGCCCCAC TTTCTCTTCA
  CCTTCCCATG TCATTCTTTC TCACCCACGC TACAGCCGGA ACTTAAGTCT CTAGCTCTTC
  CCGTTGGTGT ATTACAAAGC AGACTGGCAT CTCTAGGTCA CAGGAGCCAT TTTCAACTTC
  R
  GTCACACTGT GCGTGAATTA TTACTGGATA CAGCTTTGGG GATTTGATAA TGGTTAATGT
  CTGAGTCAGT TATTGACAAA ACAGTTGTGC ATATGCGTCT GGCTTTCAAA GCAGACCGAG
  AAAAAAAAAT TAGAAAAAAA ATCTAAGAAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321816273	CHEV_6_70820439	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221005162					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70847429 () rs orientation: forward

Symbol	Name	Function Class
Eif2ak3	eukaryotic translation initiation factor 2 alpha kinase 3	within coordinates
Rr399692	regulatory region 399692	1782 bp upstream
Rr631848	regulatory region 631848	861 bp proximal