rs221014643 SNP Detail

Summary

• ID
  rs221014643
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39365833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTTAATT CTGAATCATC
  CAGAATGAGT TCATCAGTTT CTACATCCAA AACAACAACT ATTGTTTTTG GCATATTTAG
  AGTCAGTAAT TGTATTAAGA GATTCAGGAA ATTCCAGTAG TACTATAAGG ATGGAATATA
  GCTATGATTT TTGAACTGAA TCATATGTGC TCTGAGTTAC CTTACCTATT CTTTCTGACT
  K
  ATAACCTGCC TTTTCTGCCT TTCACTAAAT GAGGGGCATC CAACTAGCTC TTTCGATAAA
  CTGAAGTCAT TTGTTTCAGG GGTATTTGTT GTTAATTTCT CCCCCCAAAT TATTGCAATT
  TCTTTGCCAA TATTTATTTT CGGCCCACAA TGTGATAATT TCAGCATTAG TAAAGGCAAT
  ACAATTTCTG TTGAGTCTAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228505	CHEV_2_39331341	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221014643					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39365833 () rs orientation: forward

Symbol	Name	Function Class
Rr373076	regulatory region 373076	1528 bp upstream