rs221036415 SNP Detail

Summary

• ID
  rs221036415
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:112453990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTGTGCAT TCCTGCAGTC
  ACCTGACCAC AGTCTGTTGT CATCCTTGGC AGTAAGACCT GTTGGATCAA TTCTTCACAA
  AGGCACAGTA AACAGTTGGC TCCCTCATTC AAAGCAGTTT CGTACAACCT TAGTTCTTCT
  AGAAATAGCA TCTTTACAAA CCCAGGTGTT TGAAACTGAA CAGGTTTTAA TTGGGGGGGG
  R
  GTATGCAAAA TGAGGCATGA GAAGCCAATA TAAATGCAGT AGATGAGCAC CAATGAAAAG
  GTATGGCTCT CCTTTCAATT GCAGGACAAC AGTGGTGGGC AGGTTATGAG GGGGGCCACA
  TGAGAGCTAG TTCTGCATAG GGAAAGCTCC TGGTGGGAAG GAGGCAGCTA CTGCTGGATG
  CCAAGCAAGG GAGGGAGAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324529022	CHEV_13_113107664	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221036415					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:112453990 () rs orientation: forward

Symbol	Name	Function Class
Ankrd55	ankyrin repeat domain 55	within coordinates
Tssr121103	transcription start site region 121103	933 bp upstream
Tssr121104	transcription start site region 121104	960 bp upstream
Tssr121105	transcription start site region 121105	991 bp upstream