rs221072376 SNP Detail

Summary

• ID
  rs221072376
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:160214718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTCAATGA ACTGTGAATC
  AAAACTATGT TTAGAAAATT GTGTCTGTAC TGAATATATA TAATTCTTTT CTTATTCCTT
  AAACAATGTA GCATAACTAT TTCAAAACAT TTACTCCATT TACTTTGGAT GTATGTAATA
  TATATTACAT ATTATATATG GGGACATAAA CATGTCTCAT TGTACATGTG TAGGTCAGAG
  R
  AAAAAAAGTG AGAGTCAAGT CTCTCCTTTT ATGTGGGTTC CCGGGATCGA ACTTGTGTCA
  TCAGACTTGG CAGCAAACAA CTTTGCCTGC TGAGCCATCT CATTGCTCCC TGCCACCGAC
  TTTTAAATTA TATTTATCTG TTTATCTATT TATGTATTTA GCTGTGTGTG TCTGTGTGTA
  TAGGCAGGCA AATGAACATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325990152	CHEV_X_157869654	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221072376					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:160214718 () rs orientation: forward

Symbol	Name	Function Class
DXMit121	DNA segment, Chr X, Massachusetts Institute of Technology 121	1680 bp distal
DXMit121.1	DNA segment, Chr X, Massachusetts Institute of Technology 121.1	1825 bp distal
Rr395859	regulatory region 395859	within coordinates