rs221084736 SNP Detail

Summary

• ID
  rs221084736
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:65134989 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCAACAGA GGGTTGCTTT
  TTGGCTCATC ATTTTCTCCA CTTCTGAAAA CAGCAGGTGT TTGTAGAACT ATCAGCTAAG
  CTGTACTGGT TTTAAGTAGC TAAGGGGAGA GAGGAATTCT TGGCGTTTTA CCCTTGTTAT
  CCTTGTGCTT TATCTGAGAG CTTTATCTGA TGATGATAAT GATGATGATA AATGTTAGTG
  R
  TGGTGGTGGT GGTGTTTGTG TGTGTGTGTG TGCATGCACG CATGCACATA TGTGTACTGA
  ATACACATGC TTGGTTGCTT ACTGGAGTTT GAAACAAGAC CTGGTGCTTG CTAGGCAAGA
  GCTTATGTGG AGCTCTCCTA TGTGGGAGTC ATTCTTTCTC AGCTTCTAGA ACCAAAGCAA
  TTTGCCGTCT ACTTCTGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323712868	CHEV_11_65057665	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221084736					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:65134989 () rs orientation: forward

Symbol	Name	Function Class
Myocd	myocardin	within coordinates
Rr251029	regulatory region 251029	within coordinates
Tssr108467	transcription start site region 108467	601 bp upstream
Tssr108468	transcription start site region 108468	560 bp upstream
Tssr108469	transcription start site region 108469	512 bp upstream
Tssr108470	transcription start site region 108470	495 bp upstream