rs221094749 SNP Detail

Summary

• ID
  rs221094749
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:99553770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGTTTAAAC TAGAGAAGCT
  GAGGCAGGAT CATAGAAAGT TCCTGGTCAG CCTGGGCTGC ATAGTAAGAA AGACCTTGCT
  ACAAGAGAGA AATGGCCAGG TGACTTGTAC TATCTTTAAA TAGGTTAGTG CTGCCTCTAG
  CATTTTTTCC TAAAACAGTC AAAAGGGACA GTAGTGTGGT TTATTTATGA AGATTCGGAG
  Y
  GAGAGCTGAG TAATTTATGT TCATTCACAC CATGAGTCAG AAAATCCTTT TTCTATTTAG
  AAGAGCAAAA ATGTTTTGAG CATCTATAGT GAGGAGGGCC ACATTTTTTT CCCCAGCTGA
  GATAAGATAG AAAGCACTTT AGGCCAAATT TGGGCAGTCT TTGTCACAAC TATCACTGTA
  CCGTGAAGCC AAGACCTAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324135515	CHEV_12_100825721	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221094749					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:99553770 () rs orientation: forward

Symbol	Name	Function Class
Gm26839	predicted gene, 26839	within coordinates
Gm53755	predicted gene, 53755	239 bp downstream
Rr269924	regulatory region 269924	within coordinates