rs221114274 SNP Detail

Summary

• ID
  rs221114274
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:49105439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCACATG CTAATTCTTT
  ACAAGTTCTT GCCAATCTTT TTTTTTTACC ATTTTATAAC TGCATAAATG TATAGAAGAT
  GCTTTGACCT AATCAACCCT CTATTATCTC TCCTCCAATC CATGTCAAGC CTGTATTATT
  TTTCCATCCC TTTATGAGTT CTGTTTTCAA ATCTACAGAA TCCATTTGGT TCTGTCTGCA
  S
  GCTTACATGT CTAGGACCAT GTCTGAGATC ATGGGCAGAC TCCAAGGCAC TCCACCTCTG
  ATGAAAACTG ACTCTTATTT TCCCAGTAAC CATCAATTGG CAGAAGGTTT TCAGCCATTG
  GTGAGTCCTT ACAGTTTAAC ACTGAGCTGT GAATATGTGA CAAGCACATT CGTAGGAATT
  TGTGGATATT ACACAATGCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324031064	CHEV_12_50159643	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221114274					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:49105439 () rs orientation: forward

Symbol	Name	Function Class
Rr263627	regulatory region 263627	1255 bp distal