rs221120941 SNP Detail

Summary

• ID
  rs221120941
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:126681003 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTCTAAC CCGCATTTGT
  TCTTTTTAAA GACTCACTTG GCCCACTTCA CAGTTCGGAT TAGGCAGGAT TTCAGAGTCA
  ACGTCTCCTC CTCCTACTGC TCCTCCTCCT CATTTTTAAA TATGGTTTTT CATTTTCTCC
  CGGGGAGGAA TGTTCAGGAA CAATATGTAC GCATCTGACC CAAAGGGGGG GGGGGGGGGG
  R
  GGGAGTAACT TGGATGTATA CATTTCACTA AAAAAAAAAA AAAAAAAAAA ATTAGCCAAT
  GCTTAGTGCA CTAAAAGATA CCTCCGGTGA CAAAAGGGCG CAATTCCGCA TATTTAACCT
  AAGAGTCTGC AAATGGTTCT AAAGACTTCC AAATCTCCTC CCTAGGATAG TTTATTTCTC
  TCTGGTAGCA TGGAGGCCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	NOD/ShiLtJ	ST/bJ	WSB/EiJ
ss382172024	MGP_WTSI_10_126282190	EVA_MGPV3	EVA_MGPV3	f	SNP	A	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	NOD/ShiLtJ	ST/bJ	WSB/EiJ
rs221120941					SNP	A	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss382172024	MGP_WTSI_10_126282190	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:126681003 () rs orientation: forward

Symbol	Name	Function Class
Gm66841	predicted gene, 66841	785 bp upstream
Rr440688	regulatory region 440688	86 bp distal
Rr440689	regulatory region 440689	233 bp distal
Rr440690	regulatory region 440690	295 bp proximal