rs221128952 SNP Detail

Summary

• ID
  rs221128952
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:113138090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCTAATCT GGCTAGCCAT
  GGGGCACCAG GAATCCACCT GTCTCTCCCT CCCCAGTGCC AGGATTACAA CCACATGCCA
  CCGTGTCTGG CTTTTTCTGT GGGTTCTGGT GTGGCAAGCA CACAATGCTG ACGGAGGCAT
  TTCTCCAGCC CTGGTTATTA TCCCTTAAAG GCACTGATCT GTCGTGATAA ACGAGCTTCA
  Y
  GATTATTCCG TTATACAAAC CTGAAGGAAA CTGTGTAAGG CCCTCCACTG CCCACCATCC
  CTCTTGACAC CTGGCCCGTG GTAAGATATT GAAACACGCA TTTATGGCTA TCGCTGGCAT
  CTTTGATTCC ACCACTTTCC TCACTCGAGT AGAGGGGAGG GGGGAAGGAG AAAGAAGGGA
  GGGGGAGGGG AACGGGGGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323856652	CHEV_11_113108578	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221128952					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:113138090 () rs orientation: forward

Symbol	Name	Function Class
D11Dcr27	DNA Segment, Chr 11, Derry C. Roopenian 27	306 bp distal
D11Mit168	DNA segment, Chr 11, Massachusetts Institute of Technology 168	270 bp distal
Slc39a11	solute carrier family 39 (metal ion transporter), member 11	within coordinates