rs221141036 SNP Detail

Summary

• ID
  rs221141036
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65413931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGAAAAAT AGCCAGGATA
  AGCAGCATTC ACCTAAGGTC ATGGGTGACA CATTGTACTC TGACCACCTA GGCTTTTTGG
  GAAGGACTAT TTTAATATAT TTCAGAAAAT AGATAATATC TTCTTTTGTG CCTTGGTAGT
  GTTATAGCTT GTCAAAATAC CCTCACTCAC AAAGACCACA GAGACTGCCA TCATTGCAAA
  R
  CGCATGAGGA TTTATTTATC CAACATGTTG GGGAAACCCC TCTCAGCACA CAGGCCGGAG
  GAGAGACCCA GAACAAAGAA AGAAAACATT TTTTTATACC TTTGTATGGG CCGGATATAG
  GCACCAGGGT AGTTTGGCTT ATTTTAATTG TTGTAGCCAA TAACCTTTTT AGACATTGGT
  TGGTTTGTAT AGGGTGACTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324073059	CHEV_12_66468144	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221141036					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65413931 () rs orientation: forward

Symbol	Name	Function Class
Rr387346	regulatory region 387346	422 bp upstream