rs221181069 SNP Detail

Summary

• ID
  rs221181069
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:151246170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggttaggga gatcactttt aaagtgcttg
  ccatgaaaac aggactgagt tcagatatca gcacagcagc atctgcctac aatcctcatg
  caggaggtgg agacaggaag atcccagagc tcagtggcta gaccctatcc caaaaacaag
  R
  tggagagtga ctgacatcca ctgctggcct ctacatgcaT GTTcacacac acacacacac
  acacacacac aaacacacCG TAAAAAAAAT GGCTTCACTC TCCCACAGTG GTAGCAAACA
  GGGTAAAAGT CTGTTACAGA TATCTCATCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320055948	CHEV_1_153217549	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221181069					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151246170 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr420285	regulatory region 420285			1151 bp proximal
Swt1	SWT1 RNA endoribonuclease homolog (S. cerevisiae)			Intron
				Noncoding-Transcript-Variant