rs221183004 SNP Detail

Summary

• ID
  rs221183004
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:138943862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tatattctc cacaccctcc ttcatttctc
  ccatttgacc aattgatatt tcatgcatat atgtatatgt atataaatgc atatcattag
  tataaccttt tcactctcta taatatcaca tgtgtgcatg tgttcaggga tgaccacttg
  K
  cactgaacca ctgatgtgct tttcctaagg aagagcatct ctctcatgct cagattttct
  cagttgcctg aagttccttg tgtaAATTCT TATGCTTCTT TTTTAAATAG TTGACTGGCA
  AAGATAAAAA CAACTGGATA TTTATTTAGT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320526180	CHEV_2_138927678	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221183004					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:138943862 () rs orientation: forward

Symbol	Name	Function Class
Rr566007	regulatory region 566007	887 bp proximal