rs221279642 SNP Detail

Summary

• ID
  rs221279642
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164475736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTT TGCCCCGTGC TCCTTCCTAA
  T
  CCAATTCCTC ACTCAATCTT ATCCT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320606535	CHEV_2_164459316	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221279642					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164475736 () rs orientation: forward

Symbol	Name	Function Class
Gm74576	predicted gene, 74576	1793 bp upstream
Rr40355	regulatory region 40355	1465 bp proximal
Rr52775	regulatory region 52775	1447 bp proximal
Wfdc16	WAP four-disulfide core domain 16	891 bp downstream