rs221280178 SNP Detail

Summary

• ID
  rs221280178
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:24175233 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTGCTGT GCTGCTGACG
  GCTCAGAGAA ATAGGGCAGG TGACAGTGAA TGGAAACCTC CCGACTGAGG GTTAAAATAC
  ATGTCTTGGC ACATGCCAAG ACGCTCAGGG GGCAGATATA GGTGGATTTC TGTGAATATG
  AGGTCAGAAT ACTCTACACA GTTAGCTCTG GGCCAGCCAA GGATGTATAG TGAGACCATG
  Y
  CTTGAAGCAA AACAAAATGA TATAAAACCC CCAAACAATC CAATCAAATA ATCAACCAAC
  AAAATAAAAA GCCCTCCAAG CCTCCCAAAA CAAAATCACC ACCACAAAAC CCATCTCTTT
  CTTTGAGTTG GCCACCACAA GAATTTTGTC ACAGTGATAG AATCAACACA CACCTCCTCT
  CTGTCTGGGC TAAGCCAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323597995	CHEV_11_24125233	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221280178					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:24175233 () rs orientation: forward

Symbol	Name	Function Class
D11Mit152	DNA segment, Chr 11, Massachusetts Institute of Technology 152	1040 bp proximal
Gm33440	predicted gene, 33440	within coordinates
Rr385801	regulatory region 385801	within coordinates