rs221303227 SNP Detail

Summary

• ID
  rs221303227
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119183165 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATGTCCTA GCTTCGAATG
  TGCACAGAAG GAGGCAAGCA GACCCCAAGG GATGAACACA GTAAAATCAG AAAGAAGATG
  AACATTTTAA CTGTCCTAAA CCAAATTTGC TTCTAAAGAG AGTACAAACA CGCGGCAGGC
  TCGTCCCCTT TGGGGAAGAC TAACTCCTCC CCCCGTAGAG CTGTTTGCTC CCACCCCACA
  K
  TCCGTCAAGC ATTTCTCTAT CTGCAAACAT TAACTCTGCT TTTTAAAAAA CGCAATGTCA
  GCTGCCCTTT TAACAGAGGC TACTGATTTA ACAGAAGGCA GGTCCAACCC CACCCTCCAA
  GGAGGACCAG GAGTTGACTG ATGCTTGTCC TGATAGAAAC AGTTGGCCAA AATGCCATCT
  TCCCTCATAA CCACTTCCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323218989	CHEV_9_119263217	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221303227					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119183165 () rs orientation: forward

Symbol	Name	Function Class
Rr688469	regulatory region 688469	1693 bp distal
Rr688471	regulatory region 688471	1824 bp distal
Rr688472	regulatory region 688472	1777 bp proximal