rs221319450 SNP Detail

Summary

• ID
  rs221319450
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:97446086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAAGGTGA TTAACTTTGG
  AACCAGATGG CCTGGATTTT ATTCCTGCTT GTTCTCTCCA TTAATGGGGT CATTTGCAGA
  AGAGCATTTA AACTCTCTGG ATCTCCATTT CCTCATCTGA AAAATAATAT AATAATACAA
  AATATAAGCA TTCTCCTAAG GTTGGTATAA AACTGTGATA ACACAAAGCA ATGGTCATTG
  R
  ACTAAGTTCT TATATAATAA GTTCTTACTG AATGTAGGTT ATAAAACAGC ATGCTTTGTT
  ATGAAGGACA TTTAGTAGAG ATATTCTGAA TGGCTGAATG AAGCAGATGT GTAAGTTTTT
  TCATCTCTGT TGGACAAGGG TACAGCTTTA GCCTACATAT GAGCTGAATT GAAACTCTCC
  AAATTAAATT TGTTCTTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321620819	CHEV_5_97727246	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221319450					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:97446086 () rs orientation: forward

Symbol	Name	Function Class
Gm72500	predicted gene, 72500	within coordinates
Rr615043	regulatory region 615043	1953 bp proximal