rs221327744 SNP Detail

Summary

• ID
  rs221327744
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67143535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAGGACAT AGGGTTCAGG
  GTTTAACAAA GTCCCCTTTG ATTTAGCTTG AAGGATCACT GGAACAGGAA AAGAAGCTGA
  GGATGGACTT AGAAAGAGCC AAGAGGAAAC TGGAGGGGGA CCTGAAACTG GCCCAAGAGT
  CCACAATGGA CATAGAAAAC GATAAACAGC AGCTCGATGA GAAACTCAAA AAGTAAGCGT
  A
  ATAGGATTCA GCCCTGACTT CTCACTGTGT GGGTGCAGGG GAAACACGGG TTTGAGTGTT
  TCCAAATGAT TGCTTCATCA TATTTGGGGT GAAATAAACA AGGGCCAGCT TTAAAAATAT
  TTAATTAAAA TGGCACTGGG TAGATTTGTA AAACATGTGT TTCTCTCTAT TTTAAGGCAA
  TCAGTATAAA AAGTTCAATT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323719220	CHEV_11_67066211	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221327744					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67143535 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Tssr3527	transcription start site region 3527	1832 bp upstream
Tssr102194	transcription start site region 102194	1955 bp downstream
Tssr102195	transcription start site region 102195	1872 bp downstream
Tssr102196	transcription start site region 102196	1833 bp downstream
Tssr102197	transcription start site region 102197	1789 bp downstream
Tssr102198	transcription start site region 102198	1728 bp downstream
Tssr102199	transcription start site region 102199	974 bp downstream
Tssr102200	transcription start site region 102200	823 bp downstream
Tssr102201	transcription start site region 102201	766 bp upstream
Tssr102202	transcription start site region 102202	1288 bp upstream
Tssr102203	transcription start site region 102203	1348 bp upstream
Tssr102204	transcription start site region 102204	1746 bp upstream
Tssr102205	transcription start site region 102205	1964 bp upstream
Tssr108529	transcription start site region 108529	1751 bp upstream
Tssr108530	transcription start site region 108530	1749 bp upstream
Tssr108531	transcription start site region 108531	1721 bp upstream
Tssr108532	transcription start site region 108532	951 bp upstream
Tssr108533	transcription start site region 108533	799 bp upstream
Tssr108534	transcription start site region 108534	105 bp upstream
Tssr108535	transcription start site region 108535	within coordinates
Tssr108536	transcription start site region 108536	1335 bp downstream
Tssr108537	transcription start site region 108537	1347 bp downstream
Tssr108538	transcription start site region 108538	1849 bp downstream