rs221367271 SNP Detail

Summary

• ID
  rs221367271
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:38123337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTCTCTG CCTAGAGCAG
  CCATCTCATT ATACCATCTA TCTGTTCGGC TCTTTGCCTG GAGCCACAGA CATTTATTAA
  TACCTGTTCA CTGCCATTTC TACTTGATGT CACTGACTAA TTTTCCCTAT ACTCCTATGG
  TTGAGAACCA TAGGCAAAAT TCCCCATGTG ATTCAGACAA ATATCTGTAT ATAAATCTAT
  M
  CTAAAAGCAA GTAATCCCAA TTTAATAAAT TCATAATTCA ATCAATCTCT GCTCCAAGAA
  ATAGGCAACT TTCATTCTAC AGCTCTCACT CAGAGCAGCC TGCATTCCCC ACAGCAGCAG
  GCCTCCTAGC CCGCCAGCAG TTTTCTTTGT TTCAATTCCT GTGCTTGAGT CCAAGCTACT
  TGTTTCAGCA CTACCGAAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324319273	CHEV_13_38031230	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221367271					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:38123337 () rs orientation: forward

Symbol	Name	Function Class
Rr283322	regulatory region 283322	65 bp proximal
Rreb1	ras responsive element binding protein 1	within coordinates