rs221380975 SNP Detail

Summary

• ID
  rs221380975
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:57869151 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTTTCCT CTTTCTCTCT
  CTTCTTTCTC CAACTTCAGA TTAGAGTCCA GCAAAGGAAA CAGAAACAAG ATCTATTTAG
  GTTTCCAAGT AACTTCATGA TCCTTTGTCT CTTTCCTTGC TTGGTCAACT CTTAGGTGAC
  TACAGTGTGT AGAACTGCAG CCTTTAGAGG AGGTTAGGAA TAGGTGAGAC CATCAGAATA
  R
  GGCACAATTG AATACAATTG AGGGTTTGTA AGAAGAAAGA CCTGAACACA CACACACACA
  CACACACACA CACACACACA CACACACACA GCATACAACA GTCACAACAC ACAGACAATG
  CATACAACAA ACACAGAACG CATGCACACA GATTTTATTA TGTCACCTCC AGGTTCTTCC
  AGAAAGAAGG ACATCGTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324051854	CHEV_12_58923352	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221380975					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:57869151 () rs orientation: forward

Symbol	Name	Function Class
Rr256918	regulatory region 256918	1450 bp proximal