rs221385932 SNP Detail

Summary

• ID
  rs221385932
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121138256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCTCTGAT TTCACTGTTT TCAGCCAGTA
  AATGTCACTC CCAATGCTGC TGCTTGCACT CACACTTAAG CGCTTTCATC TGCACTGGGT
  GCAGTGTGTC AGAGAATTCT TTGTGCAACA CTTGGTGGTG GGGGTGGGCA GGAGTAGGGG
  R
  GGTGGGGGGG GGGGAGTGGC AGTCAGCTAA GCCTAATCTT TAAACAGGGC AAAAAAACTG
  CCTGAAAGGC AGAGACAACT CTGTTTTCAT AAGATGTTTG TGATACTCAG TCCTGAGTTC
  TACCCAGTAC TCTTTCAAAG GCACGGCAGT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320903105	CHEV_3_121047525	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221385932					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121138256 () rs orientation: forward

Symbol	Name	Function Class
Alg14	asparagine-linked glycosylation 14	within coordinates
Gm33310	predicted gene, 33310	346 bp upstream
Gm66111	predicted gene, 66111	1245 bp upstream
Rr367544	regulatory region 367544	413 bp upstream
Tssr35413	transcription start site region 35413	1270 bp upstream
Tssr35414	transcription start site region 35414	1236 bp upstream