rs221417283 SNP Detail

Summary

• ID
  rs221417283
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3671478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCGTGACC TTGAAGAGAC
  CTCAGTTTCA AACAGACAAT GTGCTGTGTT GTCTGTAAGT CTTGTGGGTT AAGTATCTCT
  TTCATCACGC TGCCCTAGCA AAAGTGATGG TGGTGATTTA GAATAAAACC TCCTTTCTTT
  GAGAGTGGTC CAACAAACTG AAGTACGAAG AGAGGTGTGA GCTTTATGTC TGTATTGTTG
  R
  TAGAAGACTT CATTTCTAAT GCAGTGAGTC CAGCTCTTGT TATTATCTTC TTAATAATCA
  AGATAAAAAA ACAGTAAGCC CCCTGCCTCA TGATGTCCTG TTTGTACCCT CCTGAAGTGT
  TTCTAATCAG TGTGACATAT GTCAGCATAA GTGACAGAAA ACAGAAGTCG TTTATCTGCG
  ACCTGGAAAA AGTAGAAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320204864	CHEV_2_3587713	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221417283					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3671478 () rs orientation: forward

Symbol	Name	Function Class
Gm50615	predicted gene, 50615	within coordinates
Rr372694	regulatory region 372694	within coordinates
Rr550927	regulatory region 550927	1349 bp distal