rs221434918 SNP Detail

Summary

• ID
  rs221434918
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136515880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATAATTGAT AGCCAAACAT TTTCTACAGG
  CCGTTAAATG GTAAGACCAC AATGAAATGT ATATAATGTT GATTAAAGTG ATTTTTGCAC
  GAAGGGGTCA GAGACATTAA CAAGTTAAAA GAAAGTGTGA GCTCTCTTCC CCCCCCCCCC
  Y
  CCATACCTCT AACCTTTGTT CAGCTTGCCA GTAATTGACA CCACATGTTT ACTGGGCCTA
  TTTGGGTCCA ATTTAAGGCT GTTGCATTCA ACATATTTTG AAGTGCTCTT GAGATGAGTG
  TACCCATGGG GGCGTGGGGG TGCCCCCAGA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319996217	CHEV_1_138484719	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221434918					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136515880 () rs orientation: forward

Symbol	Name	Function Class
4933409D19Rik	RIKEN cDNA 4933409D19 gene	within coordinates
Gm57131	predicted gene, 57131	within coordinates
Rr419475	regulatory region 419475	within coordinates
Rr419476	regulatory region 419476	544 bp proximal