rs221511803 SNP Detail

Summary

• ID
  rs221511803
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:4504332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTGATTAT TCCTGCTCAT TCTTTttttt
  ttttaattcc tttctatata ctttttattt tattttattt taattaggta ttttcctcat
  ttacatttct aatgctatcc caaaagtccc ccatacccac cccccccact cccctaccca
  Y
  ccactccccc tttttggccc tggcgttccc ctgtactggg gcatataaag tttgcatgtc
  cagtgggcct ctctttccag tgatgaccga ctaggccatc ttttgataca tatgcagcta
  gagtcaagag ctctggggta ctggttagtt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325089490	CHEV_16_4686468	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221511803					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:4504332 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7918	CpG island 7918	1865 bp distal
Dnaja3	DnaJ heat shock protein family (Hsp40) member A3	within coordinates