rs221546312 SNP Detail

Summary

• ID
  rs221546312
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:111276583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACACTGTT CATCTTAATA
  GGAGATAGTA ACAAGAAAAT AATTTTAAAT GGTAATCAAT ATCACAAAAC CCAGGTGATT
  AGCATTATTT TTATTGGTAA GTTTCCTGAC ATACTTCCCT GATTTTTACC ATACACTTTG
  GCTGTAATAC CACTCGAGAG CCACCTTATA ACATGATGGT TTTTGCTTAT CACTTTCTAT
  A
  GAAAATTAGC AACTTAACTC AGTCTTGCTT CTAGAACGTT CCTCCCATTC TGCCTACTTC
  CTTTCTTTGG CTCAGTACAT TACCTGAAAG GAAAATCTAA AGTCGGTCAG AATTATTCAG
  CCCATTGTCC ACGGGATACA GTCCTTCATA GTCTTTGGGG GGATGGAGGC CATCGTATTT
  TACAGCTGTG GTGTCAGGAG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323473607	CHEV_10_110877778	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221546312					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:111276583 () rs orientation: forward

Symbol	Name	Function Class
Gm67980	predicted gene, 67980	1337 bp upstream
Rr225746	regulatory region 225746	112 bp proximal
Rr229875	regulatory region 229875	911 bp distal