rs221600963 SNP Detail

Summary

• ID
  rs221600963
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126838680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGAATAG GATCAACAAA
  TCATAGCCAG GATTGGGGTG CCTGAAATCT AGTCCTAGCA CCTAAGAGGA GGTAGAGGCA
  GGAGGATAAA GCCATGGATT TGAGGCCAGC CTGGTCTACA CTGTGAGTTC TAGGAAAGCC
  AGTGAGAGTC TGATTCAAAC AAAACAGGAA CTAACAACAA ACGCCAAAAT AAAAAAGAAA
  R
  AAGCCACAAA ATAGAGGATA GAAGATAATA GTCATTAACT TATCCAGAGA CAGAGTCTTT
  GAAGGCAAGC CCCACATATT CTGTAGAAAA ACAAGGCCTT CCTACTGTTT ATTATTGAGT
  ACCGCACTTA CAAACGGTCT ATTTTGGTTT ACTTCCTCTT TGGAATGATC CTGGCCTTGG
  GATCCAGTTG GCTTTCTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320498729	CHEV_2_126822496	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221600963					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126838680 () rs orientation: forward

Symbol	Name	Function Class
Rr564430	regulatory region 564430	1994 bp distal
Rr564431	regulatory region 564431	within coordinates